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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ProActive" in publications use:'
type: software
license: GPL-2.0-only
title: 'ProActive: Detect Elevations and Gaps in Mapped Sequencing Read Coverage'
version: 0.1.0.9000
doi: 10.32614/CRAN.package.ProActive
abstract: Automate the detection of gaps and elevations in mapped sequencing read
  coverage using a 2D pattern-matching algorithm. 'ProActive' detects, characterizes
  and visualizes read coverage patterns in both genomes and metagenomes. Optionally,
  users may provide gene annotations associated with their genome or metagenome in
  the form of a .gff file. In this case, 'ProActive' will generate an additional output
  table containing the gene annotations found within the detected regions of gapped
  and elevated read coverage. Additionally, users can search for gene annotations
  of interest in the output read coverage plots.
authors:
- family-names: Maier
  given-names: Jessie
  email: jlmaier@ncsu.edu
  orcid: https://orcid.org/0009-0001-8575-5386
- family-names: Kleiner
  given-names: Manuel
  orcid: https://orcid.org/0000-0001-6904-0287
repository: https://jlmaier12.r-universe.dev
repository-code: https://github.com/jlmaier12/ProActive
commit: 0f4485a518677f5a8d5c3559bf5098a05499c3f4
url: https://jlmaier12.github.io/ProActive/
contact:
- family-names: Maier
  given-names: Jessie
  email: jlmaier@ncsu.edu
  orcid: https://orcid.org/0009-0001-8575-5386