# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "ProActive" in publications use:' type: software license: GPL-2.0-only title: 'ProActive: Detect Elevations and Gaps in Mapped Sequencing Read Coverage' version: 0.0.2 doi: 10.32614/CRAN.package.ProActive abstract: Automate the detection of gaps and elevations in mapped sequencing read coverage using a 2D pattern-matching algorithm. 'ProActive' detects, characterizes and visualizes read coverage patterns in both genomes and metagenomes. Optionally, users may provide gene predictions associated with their genome or metagenome in the form of a .gff file. In this case, 'ProActive' will generate an additional output table containing the gene predictions found within the detected regions of gapped and elevated read coverage. authors: - family-names: Maier given-names: Jessie email: jlmaier@ncsu.edu orcid: https://orcid.org/0009-0001-8575-5386 - family-names: Kleiner given-names: Manuel orcid: https://orcid.org/0000-0001-6904-0287 repository: https://jlmaier12.r-universe.dev repository-code: https://github.com/jlmaier12/ProActive commit: 5f7a448e55dfff805f8b2cc40310d9cf2c2ebec1 url: https://jlmaier12.github.io/ProActive/ contact: - family-names: Maier given-names: Jessie email: jlmaier@ncsu.edu orcid: https://orcid.org/0009-0001-8575-5386